CABS: Comprehensive Analysis of Biological Sequences
Subprojects:
- BSI: Biological Sequences Integrated
(Revised
Entity-Relationship Approach)
- NNSAT: No Name Sequence Analysis Tools
(Download)
Current and future work:
- Port BSI to DB2
- Use DB2's ADTs for integrating NNSAT functionality into BSI
- Provide a WWW interface
- Use indexing techniques for faster access to DNA sequences
- Integrate and visualize 3D-structure data for proteins
- Adapt more search methods
People:
Industrial cooperation:
Publications:
- Bergholz, A., Heymann, S., Schenk, J. A., Freytag, J. C.:
"Sequence comparison using a relational database approach",
Proceedings of the International Database Engineering and Applications
Symposium (IDEAS) 1997, Montreal, August 1997
- Bergholz, A., Schenk, J. A., Heymann, S., Freytag, J. C.:
"An Entity-Relationship Approach To Biological Sequence Data",
Symposium on Complex Genetic Diseases, Max Delbrück Center
for Molecular Medicine (MDC) Berlin-Buch, September 1995
André Bergholz (2000/05/01)